Author Affiliations
Abstract
1 Istituto Italiano di Tecnologia, Molecular Microscopy and Spectroscopy, Genoa, Italy
2 Genoa Instruments, Genoa, Italy
3 University of Genoa, Dipartimento di Informatica, Bioingegneria, Robotica e Ingegneria dei Sistemi, Genoa, Italy
4 Istituto Italiano di Tecnologia, Nanoscopy and NIC@IIT, Genoa, Italy
Fluorescence confocal laser-scanning microscopy (LSM) is one of the most popular tools for life science research. This popularity is expected to grow thanks to single-photon array detectors tailored for LSM. These detectors offer unique single-photon spatiotemporal information, opening new perspectives for gentle and quantitative superresolution imaging. However, a flawless recording of this information poses significant challenges for the microscope data acquisition (DAQ) system. We present a DAQ module based on the digital frequency domain principle, able to record essential spatial and temporal features of photons. We use this module to extend the capabilities of established imaging techniques based on single-photon avalanche diode (SPAD) array detectors, such as fluorescence lifetime image scanning microscopy. Furthermore, we use the module to introduce a robust multispecies approach encoding the fluorophore excitation spectra in the time domain. Finally, we combine time-resolved stimulated emission depletion microscopy with image scanning microscopy, boosting spatial resolution. Our results demonstrate how a conventional fluorescence laser scanning microscope can transform into a simple, information-rich, superresolved imaging system with the simple addition of a SPAD array detector with a tailored data acquisition system. We expected a blooming of advanced single-photon imaging techniques, which effectively harness all the sample information encoded in each photon.
fluorescence lifetime image scanning microscopy digital frequency domain single photon 
Advanced Photonics
2024, 6(1): 016003
Author Affiliations
Abstract
1 Southern University of Science and Technology, College of Engineering, UTS-SUSTech Joint Research Centre for Biomedical Materials and Devices, Department of Biomedical Engineering, Shenzhen, China
2 City University of Hong Kong, Department of Biomedical Engineering, Hong Kong, China
3 Peking University, College of Future Technology, Department of Biomedical Engineering, Beijing, China
4 University of Technology Sydney, Institute for Biomedical Materials and Devices (IBMD), Faculty of Science, Sydney, Australia
In light-sheet fluorescence microscopy, the axial resolution and field of view are mutually constrained. Axially swept light-sheet microscopy (ASLM) can decouple the trade-off, but the confocal detection scheme using a rolling shutter also rejects fluorescence signals from the specimen in the field of interest, which sacrifices the photon efficiency. Here, we report a laterally swept light-sheet microscopy (LSLM) scheme in which the focused beam is first scanned along the axial direction and subsequently laterally swept with the rolling shutter. We show that LSLM can obtain a higher photon efficiency when similar axial resolution and field of view can be achieved. Moreover, based on the principle of image scanning microscopy, applying the pixel reassignment to the LSLM images, hereby named iLSLM, improves the optical sectioning. Both simulation and experimental results demonstrate the higher photon efficiency with similar axial resolution and optical sectioning. Our proposed scheme is suitable for volumetric imaging of specimens that are susceptible to photobleaching or phototoxicity.
light-sheet fluorescence microscopy image scanning microscopy volumetric imaging pixel reassignment 
Advanced Photonics Nexus
2023, 2(1): 016001
作者单位
摘要
1 中国科学院微电子研究所,北京 100094
2 中国科学院大学,北京 100049
纸币是国家发行并强制使用的货币符号,2019年中国人民银行发行的2019年版第五套人民币纸币,两面采用了抗脏污保护涂层,使纸币的整洁度明显改善。作为“国家名片”,在纸币生产过程中,对每一道工艺都有严格的质量控制,涂层是通过涂布机将涂布液转移、固化至纸币两面,由此称为涂布工艺。为了更加合理地控制涂布质量,生产中需要检测纸币涂层的厚度。针对该需求,文中建立了纸币图纹作为复杂衬底的涂层厚度光学漫反射模型,采用傅里叶近红外光谱仪和激光共聚焦显微系统对已涂布和未涂布的纸币进行识别并定量检测。文中首先根据涂层物质在近红外光谱可被有效识别的特点,对涂层的近红外吸收光谱数据提出了基于多元散射校正(MSC)与二阶导组合的分析方法,确定4 346.764 cm−1为特征波数。再根据反射率、粗糙度对涂层厚度的模型解耦,最后通过激光共聚焦显微系统检测了已涂布纸币的涂层变化,并将其与模型的厚度解耦结果关联,得出测量涂层厚度最小为3.807 μm,最大为12.738 μm。最终结果表明该检测方法对纸币生产中涂层质量控制具有重要的实践指导意义。
涂层厚度 近红外吸收光谱 多元散射校正 二阶导数光谱 激光共聚焦 coating thickness NIR absorbance spectroscopy multivariate scattering correction second-order derivative spectrum confocal laser scanning microscopy 
红外与激光工程
2022, 51(12): 20220156
作者单位
摘要
1 深圳大学物理与光电工程学院,光电子器件与系统教育部/广东省重点实验室,广东 深圳 518060
2 深圳大学化学与环境工程学院,广东 深圳 518060
为了进一步提高成像速度和分辨率,提出了基于双螺旋点扩展函数(DH-PSF)工程的多焦点双光子激光扫描显微成像方法和系统(DH-MTPLSM)。在激发光路中,通过高速相位型空间光调制器(SLM)同时实现了三维多焦点阵列的产生和在样品面上的高精度并行数字寻址扫描;在探测光路中,通过双螺旋相位片将系统探测PSF调制为DH-PSF,从而提供样品的轴向信息,减少轴向扫描层数,进而提高三维成像速度;结合基于DH-PSF的数字重聚焦算法,恢复出不同深度样本的宽场图像,通过单次二维扫描获得样品的三维光切片信息。在此基础上,利用搭建的DH-MTPLSM系统开展了小鼠肾组织切片的双光子成像实验,验证了该方法的快速三维高分辨成像能力,这对于MTPLSM的发展具有重要的意义。
成像系统 荧光显微 多焦点双光子激光扫描显微 双螺旋点扩展函数 数字重聚焦 空间光调制器 
光学学报
2022, 42(14): 1411001
作者单位
摘要
华中科技大学 材料科学与工程学院 连接与电子封装中心, 武汉430074
提出了一种光纤折射率分布的测量方法,采用白光扫描干涉技术,并在参考镜上构造与光纤样品相同的结构来克服白光相干长度短的限制,优化了光路,提高了干涉条纹间的对比度。采用与白光干涉信号的包络线呈高斯分布的Morlet小波作为小波变换的母小波进行拟合处理,得到光纤与已知折射率的匹配液之间的相对高度。通过计算获得光纤的折射率分布,并对获得的数据采用光纤折射率分布的经典函数进行拟合,得到多模光纤和单模光纤的决定系数分别为0.997 2和0.996 4。最后将实验获得的结果与官方参数进行比较,误差为0.01%,表明该种方法测量的精度较高,完全可以用来测量光纤的折射率。
干涉仪 扫描显微镜 折射率剖面 光纤测量 条纹分析 Interferometry Scanning microscopy Refractivity profiles Fiber measurements Fringe analysis 
光子学报
2021, 50(4): 39
魏通达 1张运海 1,*昌剑 1季林 1[ ... ]缪佳 2
作者单位
摘要
1 中国科学院苏州生物医学工程技术研究所 医用光学重点实验室,江苏 苏州 215163
2 江苏省医疗器械检验所苏州分所,江苏 苏州 215163
鉴于双光子受激发射损耗(STED)复合显微镜在神经疾病临床诊断及脑科学研究中的重要作用,对双光子STED复合显微成像中多波长选通、多光束合束、关键技术指标等进行了研究,完成了复合显微镜样机系统集成研制和复合成像。该复合显微镜可以对荧光标记的样本进行扫描成像,具备红绿双色荧光扫描成像功能、双光子绿色荧光成像功能和STED超分辨绿色荧光成像功能。测试结果表明,该复合显微镜成像深度达到700 μm,分辨率优于60 nm。
荧光显微 双光子显微 超高分辨率 受激发射损耗 扫描显微 fluorescence microscopy two-photon microscopy super resolution stimulated emission depletion scanning microscopy 
光学仪器
2020, 42(4): 67
Author Affiliations
Abstract
1 MOE Key Laboratory of Laser Life Science & Institute of Laser Life Science, College of Biophotonics, South China Normal University, Guangzhou 510631, China
2 Guangdong Provincial Key Laboratory of Laser Life Science, College of Biophotonics, South China Normal University, Guangzhou 510631, China
The previous methods to measure flow speed by photoacoustic microscopy solely focused on either the transverse or the axial flow component, which did not reflect absolute flow speed. Here, we present absolute flow speed maps by combining Doppler bandwidth broadening with volumetric photoacoustic microscopy. Photoacoustic Doppler bandwidth broadening and photoacoustic tomographic images were applied to measure the transverse flow component and the Doppler angle, respectively. Phantom experiments quantitatively demonstrated that ranges of 55° to 90° Doppler angle and 0.5 to 10 mm/s flow speed can be measured. This tomography-assisted method provides the foundation for further measurement in vivo.
medical optics and biotechnology photoacoustic imaging scanning microscopy flow speed 
Chinese Optics Letters
2020, 18(10): 101702
Wei Yan 1,2Yanlong Yang 3Yu Tan 2Xun Chen 2[ ... ]Tong Ye 2,4,6,*
Author Affiliations
Abstract
1 Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province, College of Optoelectronic Engineering, Shenzhen University, Shenzhen 518060, China
2 Department of Bioengineering and the COMSET, Clemson University, Clemson, South Carolina 29634, USA
3 State Key Laboratory of Transient Optics and Photonics, Xi’an Institute of Optics and Precision Mechanics, Chinese Academy of Science, Xi’an 710119, China
4 Department of Regenerative Medicine and Cell Biology, Medical University of South Carolina, Charleston, South Carolina 29425, USA
5 e-mail: jlqu@szu.edu.cn
6 e-mail: ye7@clemson.edu
Stimulated emission depletion (STED) microscopy is one of far-field optical microscopy techniques that can provide sub-diffraction spatial resolution. The spatial resolution of the STED microscopy is determined by the specially engineered beam profile of the depletion beam and its power. However, the beam profile of the depletion beam may be distorted due to aberrations of optical systems and inhomogeneity of a specimen’s optical properties, resulting in a compromised spatial resolution. The situation gets deteriorated when thick samples are imaged. In the worst case, the severe distortion of the depletion beam profile may cause complete loss of the super-resolution effect no matter how much depletion power is applied to specimens. Previously several adaptive optics approaches have been explored to compensate aberrations of systems and specimens. However, it is difficult to correct the complicated high-order optical aberrations of specimens. In this report, we demonstrate that the complicated distorted wavefront from a thick phantom sample can be measured by using the coherent optical adaptive technique. The full correction can effectively maintain and improve spatial resolution in imaging thick samples.
Fluorescence microscopy Adaptive imaging Confocal microscopy Scanning microscopy 
Photonics Research
2017, 5(3): 03000176
作者单位
摘要
国际竹藤中心, 竹藤科学与技术重点实验室, 北京 100102
整合共聚焦显微荧光和拉曼光谱成像技术系统研究了黄藤藤茎组织中不同类型细胞以及同一细胞不同形态区域的木质素区域化学特点。 共聚焦荧光成像表明黄藤藤茎组织中木质素主要汇聚于初生木质部导管、 次生木质部导管、 维管束间的薄壁组织细胞以及纤维细胞角隅区。 基于荧光光谱差异的光谱成像线性拆分结果显示纤维细胞次生壁由宽、 窄层交替的同心层状结构组成, 且窄层具有更高的木质化程度。 比较黄藤、 毛竹、 芒草、 毛白杨和虎皮松拉曼光谱发现黄藤材细胞壁拉曼光谱与阔叶木毛白杨类似, 证实了黄藤材的化学组成更加趋近于阔叶木毛白杨。 对拉曼光谱中木质素特征峰成像进一步揭示出纤维细胞中木质素不均一的分布规律: 其中细胞角隅胞间层和复合胞间层的拉曼信号强度最高, 表明较高的木质化程度, 其次是次生壁中的窄层, 而次生壁宽层中拉曼特征峰强度最低, 这一分布规律与竹材纤维细胞中木质素分布规律类似。 宽、 窄层中木质素不仅存在浓度上的差异, 而且木质素基本结构单元的比例亦不同。 采取光谱去卷积的方法排除了碳水化合物的影响, 发现窄层中愈创木基(G型)木质素与紫丁香基木质素(S型)比例为0.19, 而在宽层中这一比值为0.14, 这一结果亦解释了宽、 窄层荧光光谱间的差异。 该研究结果对探索黄藤细胞壁生物合成及力学响应机制研究具有重要理论指导意义。
木质素 微区分布 共聚焦显微荧光成像 共聚焦显微拉曼光谱成像 Lignin Micro-distribution Fluorescence confocal laser scanning microscopy Confocal Raman microscopy 
光谱学与光谱分析
2017, 37(10): 3138
Author Affiliations
Abstract
Instrument Science and Technology, Harbin Institute of Technology, Harbin 150001, China
We propose an adaptive parallel coordinate (APC) algorithm for quickly forming a series of focused spots at a multimode fiber (MMF) output by controlling the MMF input field with a spatial light modulator (SLM). Only passing over the SLM once, we can obtain SLM reflectance to form focused spots on different positions. Compared with the transmission matrix method, our APC does not require iterations and massive calculations. The APC does not require as much access device time as the adaptive sequential coordinate ascent (SCA) algorithm. The experiment results demonstrate that the time taken to form 100 spots with our APC is 1/54th the time with the SCA.
140.3510 Lasers, fiber 060.2350 Fiber optics imaging 110.2350 Fiber optics imaging 180.5810 Scanning microscopy 
Chinese Optics Letters
2015, 13(7): 071404

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